The Gene Index Project - Redirecting

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BLAST

General
TIGR Maize TA
Maize Repeat db
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AZM5
TIGR maize BACs
Gene annotation

Cell Genomics
Fluorescent-tagged subcellular markers
 

Assembly Information

Release 3.0MF - November 26, 2003
Release 3.0HC - November 26, 2003
Release 3.0ALL - November 26, 2003
Release 3.0UF - November 26, 2003

Description and analysis of the third assembly of maize sequences (methylation filtered and high Cot).

Summary
A summary of sequence reads and assembly statistics.

Repeat analysis
A summary of the statistics generated by a filtering module from the Paracel Transcript Assembler package (Paracel Inc.) after masking the repeats in the methylation filtered and high Cot sequences using the TIGR Cereal Repeat Database as a reference.

Gene matches to maize genomic sequences
A summary of the results obtained after searching the Assembled Zea mays (AZM) and singleton sequences against a number of databases including the TIGR non-redundant amino acid database (nraa), the plant Gene Indices and the maize High Throughput cDNAs (HTCs) from GenBank.