Whole Genome Shotgun Effort
This page provides an update on the status of the end sequencing effort in all three centers, as well as three types of search tools against the T. cruzi end sequence database: search by clone name, sequence similarity searching, and BAC end sequence database search with large queries. Our end-sequence database is updated daily.
- Status Report
View end-sequencing project statistics for all three centers.
- Blast Search Perform Blast Searches of your nucleotide or protein sequence using the tigrblast server against the T. cruzi individual reads or contig sequences. The WGS_individual_reads database contains all sequences from TC3-BAC, CHORI-105 and whole genome shotgun libraries generated by the T.cruzi Consortium. Individual databases from TC3-BAC and CHORI-105 libraries are also available for searching. WGS_tcruzi database contains preliminary contig sequences generated during the assembly process.
- Retrieve End Sequences for a TC3-BAC clone
(with links to Genbank accessions as they become available)
For Comments/Questions send mail to tcruzi@tigr.org.
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