>gi|22530789|gb|AY116856.1|:9-1602 30373AAGCTTGACTGACACTTTTGCCTTGGGGTTGACCTGATTATAATTTTTTGTTAAGAGGGA:29665+31795 atgaaatttcacttatattggattaggatatcgaaagtggctgcagaaacttgcttaaaa |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| atgaaatttcacttatattggattaggatatcgaaagtggctgcagaaacttgcttaaaa gacgaacgaccataccatgtaactcgaatgtttttnaaaaaccatttctggtgcaatgaa ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| gacgaacgaccataccatgtaactcgaatgtttttaaaaaaccatttctggtgcaatgaa cattgaagtgaagataaacagattgatttacacaaaaatgagtcagccaagtagcaaatc |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| cattgaagtgaagataaacagattgatttacacaaaaatgagtcagccaagtagcaaatc tagtctgttagtctctgntanagactctggttacacatacacagagttcctatgcaatag ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| tagtctgttagtctctgttagagactctggttacacatacacagagttcctatgcaatag aatcttcagataagattaggcttttaactccaagtatttgaagagtaatgngactcttgt |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| aatcttcagataagattaggcttttaactccaagtatttgaagagtaatgagactcttgt ctgaatcgttgtgtagactttgctagtgcctagtgagatcatagatagtttagcttgctg |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ctgaatcgttgtgtagactttgctagtgcctagtgagatcatagatagtttagcttgctg cttctttgccttcatccatggtgtaaactggtatttcccagttcttgttctttttcggat |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| cttctttgccttcatccatggtgtaaactggtatttcccagttcttgttctttttcggat catcagtcaaagtgagatcggtttcgtactctctaaatgttttgaagaatgtctttgcac |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| catcagtcaaagtgagatcggtttcgtactctctaaatgttttgaagaatgtctttgcac ccatcattatcaacctctccaccatgaacaactggtaattgttctcgatgatcggatcca |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ccatcattatcaacctctccaccatgaacaactggtaattgttctcgatgatcggatcca aaatctcactaaaattcgatgaatacgccactttgtat------77-------ctgatag |||||||||||||||||||||||||||||||||||||| ||||||| aaatctcactaaaattcgatgaatacgccactttgtatctgcag...ttttacctgatag ctagaggtgaaaagaaatcaggggttctttcattagaaccgataaaaagagtccgtcctg |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ctagaggtgaaaagaaatcaggggttctttcattagaaccgataaaaagagtccgtcctg gtgggatttgtttctgaattctgccaatgatgaattctggccgtgtgtctctatctaaat |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gtgggatttgtttctgaattctgccaatgatgaattctggccgtgtgtctctatctaaat gtggaaactggcttctttccacgcgaaatctgtcttttcttgttttcagtttgtcacctc |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gtggaaactggcttctttccacgcgaaatctgtcttttcttgttttcagtttgtcacctc gacgaacatggatngcatcgtaatcaccaagttttgcttttat------71-------ct ||||||||||||| ||||||||||||||||||||||||||||| || gacgaacatggattgcatcgtaatcaccaagttttgcttttatctgttc...tctttcct gaaagctagattatgtgcaactccttcaccttttctgcagcatctctcaatcttgatgct |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gaaagctagattatgtgcaactccttcaccttttctgcagcatctctcaatcttgatgct gccatagtcnggagaaatgaataaggaagcatgacgtcgctacgattacctcgatccttg ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| gccatagtctggagaaatgaataaggaagcatgacgtcgctacgattacctcgatccttg cattcaacaaac------126------catgcaagggggcttgcggttcggttaatgagc |||||||||||| ||||||||||||||||||||||||||||||||| cattcaacaaacctacaa...gcttaccatgcaagggggcttgcggttcggttaatgagc aaaagatttgtaaagtcgctagagtcatttagctcatgcctgtttgccccatatacatgc |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| aaaagatttgtaaagtcgctagagtcatttagctcatgcctgtttgccccatatacatgc gcactcccacgttctttcaatttcatactcgtcgatagcattatgtgccatggttccgag |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| gcactcccacgttctttcaatttcatactcgtcgatagcattatgtgccatgtttccgag tcatccaagatcacaggtattttctcagagatgagatcaatatcatacaatgattccatt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| tcatccaagatcacaggtattttctcagagatgagatcaatatcatacaatgattccatt gcacaagagctcacttcccaa------101------ctttcctctctagtttcattgttg ||||||||||||||||||||| |||||||||||||||||||||||| gcacaagagctcacttcccaactaaga...tctcacctttcctctctagtttcattgttg gatcgattaagtatacccttcttgttatgtattggattgatgcacatccgagatggcatt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gatcgattaagtatacccttcttgttatgtattggattgatgcacatccgagatggcatt acaaaagtc------162------ctgttcagaaacatggcttcttcaagggcacatcta ||||||||| |||||||||||||||||||||||||||||||||||| acaaaagtcctgcaa...agttacctgttcagaaacatggcttcttcaagggcacatcta aggctagattcttggtgacccaaaccggcacaggtctcacagttcttaccaggacaatcg |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| aggctagattcttggtgacccaaaccggcacaggtctcacagttcttaccaggacaatcg attctgtttccccagtacaagtacttgtccgacaaactatgctgtgtcttgtttcgagtt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| attctgtttccccagtacaagtacttgtccgacaaactatgctgtgtcttgtttcgagtt gacctcacaaaataaccaattagggtngtctgatgcggtaaagccaatccgccggtggag |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| gacctcacaaaataaccaattagggttgtccgatacggtaaagccaatccgccggtggag atcaccgaagtgaaaaggaggagaaatgcaactgcgactatacataacagaacaagtctt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| atcaccgaagtgaaaaggaggagaaatgcaactgcgactatacataacagaacaagtctt tgagatcctggagtggcttttaacttatggggtttgctcattgtcgcc |||||||||||||||||||||||||||||||||||||||||||||||| tgagatcctggagtggcttttaacttatggggtttgctcattgtcgcc psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1583 3 0 7 0 0 5 537 - gi|22530789|gb|AY116856.1| 1603 9 1602 30373AAGCTTGACTGACACTTTTGCCTTGGGGTTGACCTGATTATAATTTTTTGTTAAGAGGGA 91479 29665 31795 6 578,230,134,234,93,324, 1,579,809,943,1177,1270, 29665,30320,30621,30881,31216,31471, atgaaatttcacttatattggattaggatatcgaaagtggctgcagaaacttgcttaaaagacgaacgaccataccatgtaactcgaatgtttttnaaaaaccatttctggtgcaatgaacattgaagtgaagataaacagattgatttacacaaaaatgagtcagccaagtagcaaatctagtctgttagtctctgntanagactctggttacacatacacagagttcctatgcaatagaatcttcagataagattaggcttttaactccaagtatttgaagagtaatgngactcttgtctgaatcgttgtgtagactttgctagtgcctagtgagatcatagatagtttagcttgctgcttctttgccttcatccatggtgtaaactggtatttcccagttcttgttctttttcggatcatcagtcaaagtgagatcggtttcgtactctctaaatgttttgaagaatgtctttgcacccatcattatcaacctctccaccatgaacaactggtaattgttctcgatgatcggatccaaaatctcactaaaattcgatgaatacgccactttgtat,ctgatagctagaggtgaaaagaaatcaggggttctttcattagaaccgataaaaagagtccgtcctggtgggatttgtttctgaattctgccaatgatgaattctggccgtgtgtctctatctaaatgtggaaactggcttctttccacgcgaaatctgtcttttcttgttttcagtttgtcacctcgacgaacatggatngcatcgtaatcaccaagttttgcttttat,ctgaaagctagattatgtgcaactccttcaccttttctgcagcatctctcaatcttgatgctgccatagtcnggagaaatgaataaggaagcatgacgtcgctacgattacctcgatccttgcattcaacaaac,catgcaagggggcttgcggttcggttaatgagcaaaagatttgtaaagtcgctagagtcatttagctcatgcctgtttgccccatatacatgcgcactcccacgttctttcaatttcatactcgtcgatagcattatgtgccatggttccgagtcatccaagatcacaggtattttctcagagatgagatcaatatcatacaatgattccattgcacaagagctcacttcccaa,ctttcctctctagtttcattgttggatcgattaagtatacccttcttgttatgtattggattgatgcacatccgagatggcattacaaaagtc,ctgttcagaaacatggcttcttcaagggcacatctaaggctagattcttggtgacccaaaccggcacaggtctcacagttcttaccaggacaatcgattctgtttccccagtacaagtacttgtccgacaaactatgctgtgtcttgtttcgagttgacctcacaaaataaccaattagggtngtctgatgcggtaaagccaatccgccggtggagatcaccgaagtgaaaaggaggagaaatgcaactgcgactatacataacagaacaagtctttgagatcctggagtggcttttaacttatggggtttgctcattgtcgcc, atgaaatttcacttatattggattaggatatcgaaagtggctgcagaaacttgcttaaaagacgaacgaccataccatgtaactcgaatgtttttaaaaaaccatttctggtgcaatgaacattgaagtgaagataaacagattgatttacacaaaaatgagtcagccaagtagcaaatctagtctgttagtctctgttagagactctggttacacatacacagagttcctatgcaatagaatcttcagataagattaggcttttaactccaagtatttgaagagtaatgagactcttgtctgaatcgttgtgtagactttgctagtgcctagtgagatcatagatagtttagcttgctgcttctttgccttcatccatggtgtaaactggtatttcccagttcttgttctttttcggatcatcagtcaaagtgagatcggtttcgtactctctaaatgttttgaagaatgtctttgcacccatcattatcaacctctccaccatgaacaactggtaattgttctcgatgatcggatccaaaatctcactaaaattcgatgaatacgccactttgtat,ctgatagctagaggtgaaaagaaatcaggggttctttcattagaaccgataaaaagagtccgtcctggtgggatttgtttctgaattctgccaatgatgaattctggccgtgtgtctctatctaaatgtggaaactggcttctttccacgcgaaatctgtcttttcttgttttcagtttgtcacctcgacgaacatggattgcatcgtaatcaccaagttttgcttttat,ctgaaagctagattatgtgcaactccttcaccttttctgcagcatctctcaatcttgatgctgccatagtctggagaaatgaataaggaagcatgacgtcgctacgattacctcgatccttgcattcaacaaac,catgcaagggggcttgcggttcggttaatgagcaaaagatttgtaaagtcgctagagtcatttagctcatgcctgtttgccccatatacatgcgcactcccacgttctttcaatttcatactcgtcgatagcattatgtgccatgtttccgagtcatccaagatcacaggtattttctcagagatgagatcaatatcatacaatgattccattgcacaagagctcacttcccaa,ctttcctctctagtttcattgttggatcgattaagtatacccttcttgttatgtattggattgatgcacatccgagatggcattacaaaagtc,ctgttcagaaacatggcttcttcaagggcacatctaaggctagattcttggtgacccaaaccggcacaggtctcacagttcttaccaggacaatcgattctgtttccccagtacaagtacttgtccgacaaactatgctgtgtcttgtttcgagttgacctcacaaaataaccaattagggttgtccgatacggtaaagccaatccgccggtggagatcaccgaagtgaaaaggaggagaaatgcaactgcgactatacataacagaacaagtctttgagatcctggagtggcttttaacttatggggtttgctcattgtcgcc,