>gi|21386944|gb|AY114557.1|:0-1109 43304AAGCTTCAGCTTAGCAGAGAAGGTCTGGAAGCAATTAGCAGAATTACAACTCCTATTTCT:81974+84522 attattggattcttcagcgctagagacattcttaatcaatccaagtaaaaatattatgtc |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| attattggattcttcagcgctagagacattcttaatcaatccaagtaaaaatattatgtc gatactccaaaaaattgggcaaagcttggatacttcggctcccatcctatctccgctcgt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gatactccaaaaaattgggcaaagcttggatacttcggctcccatcctatctccgctcgt gtcttagagttgttcagcttcttccctaaaggaccactggtgc------81-------tt ||||||||||||||||||||||||||||||||||||||||||| || gtcttagagttgttcagcttcttccctaaaggaccactggtgcctacaa...actcactt gtaaaacctttgaacttcttatcaaattttccgctttgagccatcaggtccatcacctct |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gtaaaacctttgaacttcttatcaaattttccgctttgagccatcaggtccatcacctct tgc------83-------cttgacaaaggatggttgtcacaacccaagaaaatccgagca ||| |||||||||||||||||||||||||||||||||||||||||| tgcctgaga...cattaccttgacaaaggatggttgtcacaacccaagaaaatccgagca ccggctttcttcttcatgattgcaactgccagcgatgctgcatc------125------c |||||||||||||||||||||||||||||||||||||||||||| | ccggctttcttcttcatgattgcaactgccagcgatgctgcatcctgttc...atatacc tcatagtgtatgagatttagaatatgatcaggacgagcatcaattgtctccttactcaac |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| tcatagtgtatgagatttagaatatgatcaggacgagcatcaattgtctccttactcaac cagtaagtatgtgcacctctagtttctgt------107------gtaaagccctgctagt ||||||||||||||||||||||||||||| |||||||||||||||| cagtaagtatgtgcacctctagtttctgtgtataa...ggatatgtaaagccctgctagt ctaaggacagtccctccacattccaacactactttttcagctttcaaaagcacatcagtt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ctaaggacagtccctccacattccaacactactttttcagctttcaaaagcacatcagtt cttggactctttcccagtggcactactggagaatc------293------ctcgttgcat ||||||||||||||||||||||||||||||||||| |||||||||| cttggactctttcccagtggcactactggagaatcctgcag...acaaacctcgttgcat tctccgttatcaaagcaatcataaggtgcagaactagatgtgaataagaatgatccttcg |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| tctccgttatcaaagcaatcataaggtgcagaactagatgtgaataagaatgatccttcg ccattccagtttgatgctgcattc------240------ctgacttcaccagcataatca |||||||||||||||||||||||| ||||||||||||||||||||| ccattccagtttgatgctgcattcctgatc...aatcacctgacttcaccagcataatca gcgctttgtgatggtggagcacaaaagatcacataggagaactttcccccatattcggtt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gcgctttgtgatggtggagcacaaaagatcacataggagaactttcccccatattcggtt cctttaagagatggtttgatacccaaattctccaactcaccatgatgatttgttgttact |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| cctttaagagatggtttgatacccaaattctccaactcaccatgatgatttgttgttact gtctgcccaaagatttgagactctggatgttc------282------ctgtctccactgt |||||||||||||||||||||||||||||||| ||||||||||||| gtctgcccaaagatttgagactctggatgttcctgctc...ttatacctgtctccactgt tctgcaactaagcgtccaagaacacccggtccaacaatcagcagatcgtttgctccaatt |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| tctgcaactaagcgtccaagaacacccggtccaacaatcagcagatcgtttgctccaatt gaaacatgagactggaccttcaagccatcactggtctcac------228------caatg |||||||||||||||||||||||||||||||||||||||| ||||| gaaacatgagactggaccttcaagccatcactggtctcaccttcat...agataccaatg gtggaggaagaagaggcttgaataggggtcgccattaacgaagacgttaatggaagaaaa |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gtggaggaagaagaggcttgaataggggtcgccattaacgaagacgttaatggaagaaaa aacgagactttgggtttatcctcctgacgtctcaaagcaaacttaagtgaatatgaagaa |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| aacgagactttgggtttatcctcctgacgtctcaaagcaaacttaagtgaatatgaagaa gacgctgaagtcgagtgcttggaaaagtggtgagtcgatagaattcttgaattgatcgtc |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gacgctgaagtcgagtgcttggaaaagtggtgagtcgatagaattcttgaattgatcgtc ggaaatgagatgcaagagatgaaacccat ||||||||||||||||||||||||||||| ggaaatgagatgcaagagatgaaacccat psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1109 0 0 0 0 0 8 1439 - gi|21386944|gb|AY114557.1| 1109 0 1109 43304AAGCTTCAGCTTAGCAGAGAAGGTCTGGAAGCAATTAGCAGAATTACAACTCCTATTTCT 96767 81974 84522 9 163,65,86,90,111,94,173,113,214, 0,163,228,314,404,515,609,782,895, 81974,82218,82366,82577,82774,83178,83512,83967,84308, attattggattcttcagcgctagagacattcttaatcaatccaagtaaaaatattatgtcgatactccaaaaaattgggcaaagcttggatacttcggctcccatcctatctccgctcgtgtcttagagttgttcagcttcttccctaaaggaccactggtgc,ttgtaaaacctttgaacttcttatcaaattttccgctttgagccatcaggtccatcacctcttgc,cttgacaaaggatggttgtcacaacccaagaaaatccgagcaccggctttcttcttcatgattgcaactgccagcgatgctgcatc,ctcatagtgtatgagatttagaatatgatcaggacgagcatcaattgtctccttactcaaccagtaagtatgtgcacctctagtttctgt,gtaaagccctgctagtctaaggacagtccctccacattccaacactactttttcagctttcaaaagcacatcagttcttggactctttcccagtggcactactggagaatc,ctcgttgcattctccgttatcaaagcaatcataaggtgcagaactagatgtgaataagaatgatccttcgccattccagtttgatgctgcattc,ctgacttcaccagcataatcagcgctttgtgatggtggagcacaaaagatcacataggagaactttcccccatattcggttcctttaagagatggtttgatacccaaattctccaactcaccatgatgatttgttgttactgtctgcccaaagatttgagactctggatgttc,ctgtctccactgttctgcaactaagcgtccaagaacacccggtccaacaatcagcagatcgtttgctccaattgaaacatgagactggaccttcaagccatcactggtctcac,caatggtggaggaagaagaggcttgaataggggtcgccattaacgaagacgttaatggaagaaaaaacgagactttgggtttatcctcctgacgtctcaaagcaaacttaagtgaatatgaagaagacgctgaagtcgagtgcttggaaaagtggtgagtcgatagaattcttgaattgatcgtcggaaatgagatgcaagagatgaaacccat, attattggattcttcagcgctagagacattcttaatcaatccaagtaaaaatattatgtcgatactccaaaaaattgggcaaagcttggatacttcggctcccatcctatctccgctcgtgtcttagagttgttcagcttcttccctaaaggaccactggtgc,ttgtaaaacctttgaacttcttatcaaattttccgctttgagccatcaggtccatcacctcttgc,cttgacaaaggatggttgtcacaacccaagaaaatccgagcaccggctttcttcttcatgattgcaactgccagcgatgctgcatc,ctcatagtgtatgagatttagaatatgatcaggacgagcatcaattgtctccttactcaaccagtaagtatgtgcacctctagtttctgt,gtaaagccctgctagtctaaggacagtccctccacattccaacactactttttcagctttcaaaagcacatcagttcttggactctttcccagtggcactactggagaatc,ctcgttgcattctccgttatcaaagcaatcataaggtgcagaactagatgtgaataagaatgatccttcgccattccagtttgatgctgcattc,ctgacttcaccagcataatcagcgctttgtgatggtggagcacaaaagatcacataggagaactttcccccatattcggttcctttaagagatggtttgatacccaaattctccaactcaccatgatgatttgttgttactgtctgcccaaagatttgagactctggatgttc,ctgtctccactgttctgcaactaagcgtccaagaacacccggtccaacaatcagcagatcgtttgctccaattgaaacatgagactggaccttcaagccatcactggtctcac,caatggtggaggaagaagaggcttgaataggggtcgccattaacgaagacgttaatggaagaaaaaacgagactttgggtttatcctcctgacgtctcaaagcaaacttaagtgaatatgaagaagacgctgaagtcgagtgcttggaaaagtggtgagtcgatagaattcttgaattgatcgtcggaaatgagatgcaagagatgaaacccat,